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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"> |
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<html lang="en"> |
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<head> |
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<link rel="alternate" type="application/rss+xml" title="RCSB PDB - Latest Released Structures" href="/pdb/rss/LastLoad"> |
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<meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1"> |
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<title>RCSB PDB : Structure Explorer</title> |
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<link rel="shortcut icon" href="/pdbstatic/images/pdb.ico" type="image/x-icon"> |
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<link rel="stylesheet" href="/pdb/skins/pastel/styles/pdbcomp.css" type="text/css"> |
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<script type="text/javascript" language="JavaScript" src="/pdbstatic/common/lib/comp.js"></script> |
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<script type="text/javascript" language="JavaScript" src="/pdbstatic/common/lib/expandable.js"></script> |
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<script type="text/javascript" language="JavaScript" src="/pdbstatic/common/lib/results.js"></script> |
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<script type="text/javascript" language="JavaScript" src="/pdbstatic/common/lib/pdbajax.js"></script> |
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<script type="text/javascript" language="JavaScript" src="/pdbstatic/common/lib/htmlhttprequest_commented.js"></script> |
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<script type="text/javascript" language="JavaScript"> |
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var resultSorts = new Array(); |
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function openWindow(url){ |
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var w = window.open ("", "win", "height=600,width=800,location,menubar,resizable,scrollbars,status,toolbar"); |
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w.location.href = url; |
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w.focus(); |
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} |
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function openWindowToSize(url,width,height){ |
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var w = window.open ("", "win", "height="+height+",width="+width+",left=80,top=100,location,menubar,resizable,scrollbars,status,toolbar"); |
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w.location.href = url; |
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w.focus(); |
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} |
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var roboloc = '/robohelp/'; |
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navsites = [ |
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"http://deposit.rcsb.org", |
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"http://sg.pdb.org", |
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"http://targetdb.pdb.org", |
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"http://function.rcsb.org:8080/pdb/function_distribution/index.html", |
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"http://mmcif.pdb.org", |
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"http://pdbml.rcsb.org", |
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"http://sw-tools.pdb.org", |
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"http://deposit.pdb.org/cc_dict_tut.html", |
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"http://pepcdb.pdb.org/" |
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]; |
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helpsites = [ |
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"data_deposition_and_processing/how_to_deposit.htm", |
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"validation_server/how_to_validate.htm", |
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"data_download/how_to_download.htm", |
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"search_database/how_to_search.htm", |
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"browse_database/how_to_browse.htm", |
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"molecular_viewers/introduction_to_molecular_viewers.htm", |
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"files_formats/structures/chemical_component_format/chemical_component_introduction.htm", |
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"data_download/structure_download.htm", |
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"data_download/ftp_services.htm", |
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"data_download/theoretical_models.htm", |
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"data_download/cd_rom_dvd.htm", |
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"structuralgenomics/sg_home.htm", |
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"structuralgenomics/targetdb.htm", |
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"structuralgenomics/pepcdb.htm", |
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"structuralgenomics/function_distributions.htm", |
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"files_formats/intro_dictionaries_file_formats.htm", |
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"software/tools/deposition_mmcif_tools.htm", |
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"data_deposition_and_processing/how_to_deposit.htm", |
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"data_deposition_and_processing/deposition_tools_at_a_glance.htm", |
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"site_navigation/citing_the_pdb.htm" |
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]; |
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navalerts = [ |
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"Discussion Forums are not yet active. Please check back later." |
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]; |
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function openWindowFromNav(urltype, urlnumber) |
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{ |
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if (urltype == 0) |
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{ |
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openWindow(navsites[urlnumber]); |
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} |
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else if (urltype == 1) |
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{ |
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callHelp(roboloc, helpsites[urlnumber]); |
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} |
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else if (urltype == 2) |
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{ |
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alert(navalerts[urlnumber]); |
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} |
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} |
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var ICONPATH = '/pdb/skins/pastel/images/tree/'; |
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USETEXTLINKS = 1; |
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STARTALLOPEN = 0; |
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USEFRAMES = 0; |
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USEICONS = 1; |
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WRAPTEXT = 0; |
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PRESERVESTATE = 1; |
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HIGHLIGHT=1; |
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ALLOWTOPLEVELRETRACTION = 1; |
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var pdbPathNames = new Object(); |
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function myInsDoc(nn,folder,opt,link,iconsrc) |
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{ |
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{ |
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if (link.substring(0,5) == '/pdb/') |
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{ |
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pdbPathNames[link] = nn; |
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} |
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} |
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var myInsDocSub = insDoc(folder,gLnk(opt, nn, link.replace(/'/g, "\\'"))); |
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myInsDocSub.xID = nn; |
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if (iconsrc) |
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{ |
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myInsDocSub.iconSrc = iconsrc; |
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} |
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else |
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{ |
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myInsDocSub.iconSrc = ICONPATH + 'ftvsquare.gif'; |
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} |
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return myInsDocSub; |
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} |
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function myInsFolder(nn,folder,link) |
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{ |
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if (link.substring(0,5) == '/pdb/') |
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{ |
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pdbPathNames[link] = nn; |
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} |
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var myInsFldSub = insFld(folder,gFld(nn, link.replace(/'/g, "\\'"))); |
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myInsFldSub.xID = nn.replace(/amp;/g, ''); |
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return myInsFldSub; |
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} |
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function checkLocation() |
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{ |
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var pn = window.location.pathname + window.location.search; |
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for (prop in pdbPathNames) |
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{ |
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if (pn.indexOf(prop) >= 0) |
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{ |
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var docObj; |
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docObj = findObj(pdbPathNames[prop]); |
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docObj.forceOpeningOfAncestorFolders(); |
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highlightObjLink(docObj); |
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break; |
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} |
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} |
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} |
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function addHomeTree() |
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{ |
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} |
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function addSearchTree() |
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{ |
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} |
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function addExploreTree() |
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{ |
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fSub = myInsDoc('<b>1CY0<\/b>',f,'S','/pdb/explore.do?structureId=1CY0'); |
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fSub = myInsFolder('Download Files',f,''); |
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fSubSub = myInsDoc('PDB File',fSub,'S','/pdb/download/downloadFile.do?fileFormat=pdb&compression=NO&structureId=1CY0'); |
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fSubSub = myInsDoc('PDB gz',fSub,'S','/pdb/files/1cy0.pdb.gz'); |
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fSubSub = myInsDoc('PDB File (Header)',fSub,'S','/pdb/download/downloadFile.do?fileFormat=pdb&headerOnly=YES&structureId=1CY0'); |
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fSubSub = myInsDoc('mmCIF File',fSub,'S','/pdb/download/downloadFile.do?fileFormat=cif&compression=NO&structureId=1CY0'); |
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fSubSub = myInsDoc('mmCIF gz',fSub,'S','/pdb/files/1cy0.cif.gz'); |
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fSubSub = myInsDoc('mmCIF File (Header)',fSub,'S','/pdb/download/downloadFile.do?fileFormat=cif&headerOnly=YES&structureId=1CY0'); |
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fSubSub = myInsDoc('PDBML/XML File',fSub,'S','/pdb/download/downloadFile.do?fileFormat=xml&compression=NO&structureId=1CY0'); |
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fSubSub = myInsDoc('PDBML/XML gz',fSub,'S','/pdb/files/1cy0.xml.gz'); |
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fSubSub = myInsDoc('PDBML/XML File (Header)',fSub,'S','/pdb/download/downloadFile.do?fileFormat=xml&headerOnly=YES&structureId=1CY0'); |
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fSubSub = myInsDoc('Biological Unit Coordinates',fSub,'S','/pdb/files/1cy0.pdb1.gz'); |
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fSub = myInsDoc('FASTA Sequence',f,'S','/pdb/download/downloadFile.do?fileFormat=FASTA&compression=NO&structureId=1CY0'); |
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fSub = myInsFolder('Display Files',f,''); |
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fSubSub = myInsDoc('Custom Structure Summary',fSub,'S','/pdb/explore/customStructureReportForm.do?exptype=misc'); |
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fSubSub = myInsDoc('PDB File',fSub,'B','/pdb/files/1cy0.pdb'); |
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fSubSub = myInsDoc('PDB File (Header)',fSub,'B','/pdb/files/1cy0.pdb?headerOnly=YES'); |
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fSubSub = myInsDoc('mmCIF File',fSub,'B','/pdb/files/1cy0.cif'); |
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fSubSub = myInsDoc('mmCIF File (Header)',fSub,'B','/pdb/files/1cy0.cif?headerOnly=YES'); |
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fSubSub = myInsDoc('PDBML/XML File',fSub,'B','/pdb/files/1cy0.xml'); |
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fSubSub = myInsDoc('PDBML/XML (Header)',fSub,'B','/pdb/files/1cy0.xml?headerOnly=YES'); |
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fSub = myInsFolder('Display Molecule',f,''); |
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fSubSub = myInsDoc('Image Gallery',fSub,'S','/pdb/explore/images.do?structureId=1CY0'); |
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| 220 |
fSubSub = myInsDoc('KiNG Viewer',fSub,'S','/pdb/static.do?p=explorer/viewers/king.jsp'); |
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| 221 |
fSubSub = myInsDoc('Jmol Viewer',fSub,'S','/pdb/static.do?p=explorer/viewers/jmol.jsp'); |
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| 222 |
fSubSub = myInsDoc('WebMol Viewer',fSub,'S','/pdb/static.do?p=explorer/viewers/webmol.jsp'); |
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fSubSub = myInsDoc('Protein Workshop',fSub,'S','/pdb/Viewers/ProteinWorkshop/protein_workshop_launch.jsp'); |
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| 224 |
fSubSub = myInsDoc('Rasmol Viewer <br>(<b>Plugin required</b>)',fSub,'B','/pdb/download/downloadFile.do?fileFormat=PDB&display=rasmol&compression=NO&structureId=1CY0'); |
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fSubSub = myInsDoc('Swiss-PDB Viewer <br>(<b>Plugin required</b>)',fSub,'B','/pdb/download/downloadFile.do?fileFormat=PDB&display=spdbv&compression=NO&structureId=1CY0'); |
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fSubSub = myInsDoc('KiNG Help',fSub,'S','javascript:callHelp(roboLoc,\'viewers/king.htm\');',ICONPATH + 'question.gif'); |
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fSubSub = myInsDoc('Jmol Help',fSub,'S','javascript:callHelp(roboLoc,\'viewers/jmol.htm\');',ICONPATH + 'question.gif'); |
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| 228 |
fSubSub = myInsDoc('WebMol Help',fSub,'S','javascript:callHelp(roboLoc,\'viewers/webmol.htm\');',ICONPATH + 'question.gif'); |
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| 229 |
fSubSub = myInsDoc('Protein Workshop Help',fSub,'S','javascript:callHelp(roboLoc,\'viewers/proteinworkshop.htm\');',ICONPATH + 'question.gif'); |
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| 230 |
fSubSub = myInsDoc('QuickPDB',fSub,'S','javascript:callHelp(roboLoc,\'viewers/thequickpdb.htm\');',ICONPATH + 'question.gif'); |
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| 231 |
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fSubSub = myInsDoc('Asymmetric Unit /<br> Biological Molecule',fSub,'S','/pdb/static.do?p=explorer/singleimage.jsp&structureId=1cy0&type=asym&size=500'); |
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| 234 |
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fSub = myInsDoc('<b>Structural Reports</b> ',f,'S','/pdb/explore/biologyAndChemistry.do'); |
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| 236 |
fSub = myInsDoc('<b>External Links</b> ',f,'S','/pdb/explore/externalReferences.do'); |
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| 237 |
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| 238 |
fSub = myInsFolder('Structure Analysis ',f,''); |
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| 239 |
fSubSub = myInsFolder('Geometry ',fSub,''); |
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| 240 |
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| 241 |
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| 242 |
fSubSubSub = myInsDoc('RCSB Graphics',fSubSub,'S','/pdb/explore/geometryGraph.do?structureId=1CY0'); |
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| 243 |
fSubSubSub = myInsDoc('RCSB Tables',fSubSub,'S','/pdb/explore/geometryDisplay.do'); |
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| 244 |
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| 245 |
fSubSubSub = myInsDoc('MolProbity Ramachandran Plot',fSubSub,'B','/pdb/images/1CY0_ram_m_500.pdf'); |
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| 246 |
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| 247 |
|
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| 248 |
fSubSub = myInsFolder('Sequence Variants ',fSub,''); |
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| 249 |
|
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| 250 |
fSubSubSub = myInsDoc('TOP1_ECOLI Variants',fSubSub,'S','/pdb/search/smartSubquery.do?structureId=1CY0&variant=1&smartSearchSubtype=StructureVariantQuery&spId=TOP1_ECOLI'); |
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| 251 |
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| 252 |
fSubSubSub = myInsDoc('TOP1_ECOLI Non-Variants',fSubSub,'S','/pdb/search/smartSubquery.do?structureId=1CY0&variant=0&smartSearchSubtype=StructureVariantQuery&spId=TOP1_ECOLI'); |
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| 253 |
|
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| 254 |
fSub = myInsFolder('Help ',f,''); |
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| 255 |
fSubSub = myInsDoc('Structure Explorer Intro',fSub,'S','javascript:callHelp(roboLoc,\'structure_explorer/introduction_to_structure_explorer.htm\');',ICONPATH + 'question.gif'); |
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| 256 |
fSubSub = myInsDoc('Molecular Viewers',fSub,'S','javascript:callHelp(roboLoc,\'molecular_viewers/introduction_to_molecular_viewers.htm\');',ICONPATH + 'question.gif'); |
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| 257 |
fSubSub = myInsDoc('Structure Summary',fSub,'S','javascript:callHelp(roboLoc,\'structure_explorer/summary_information.htm\');',ICONPATH + 'question.gif'); |
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| 258 |
fSubSub = myInsDoc('Biological Molecule',fSub,'S','javascript:callHelp(roboLoc,\'data_download/biological_unit/biological_unit_introduction.htm\');',ICONPATH + 'question.gif'); |
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| 259 |
fSubSub = myInsDoc('Biology & Chemistry',fSub,'S','javascript:callHelp(roboLoc,\'quick_links/quick_links_biology_and_chemistry.htm\');',ICONPATH + 'question.gif'); |
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| 260 |
fSubSub = myInsDoc('Sequence Details',fSub,'S','javascript:callHelp(roboLoc,\'quick_links/quick_links_sequence_details.htm\');',ICONPATH + 'question.gif'); |
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| 261 |
fSubSub = myInsDoc('Structural Features',fSub,'S','javascript:callHelp(roboLoc,\'quick_links/quick_links.structural_features.htm\');',ICONPATH + 'question.gif'); |
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| 262 |
fSubSub = myInsDoc('Materials & Methods (X-Ray)',fSub,'S','javascript:callHelp(roboLoc,\'quick_links/materials_and_methods/x-ray_materials_and_methods.htm\');',ICONPATH + 'question.gif'); |
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| 263 |
fSubSub = myInsDoc('Materials & Methods (NMR)',fSub,'S','javascript:callHelp(roboLoc,\'quick_links/materials_and_methods/nmr_materials_and_methods.htm\');',ICONPATH + 'question.gif'); |
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| 264 |
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| 265 |
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| 266 |
} |
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| 267 |
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| 268 |
function addReportTree() |
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| 269 |
{ |
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| 270 |
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| 271 |
fSub = myInsDoc('<b>Show Query Details<\/b>',f,'S','/pdb/static.do?p=results/queryDesc.jsp'); |
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| 272 |
fSub = myInsDoc('Results Help',f,'S','javascript:callHelp(\'/robohelp/\',\'query_results_browser/introduction_to_results_browser.htm\');',ICONPATH + 'question.gif'); |
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| 273 |
|
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| 274 |
} |
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| 275 |
|
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| 276 |
function addQueriesTree() |
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| 277 |
{ |
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| 278 |
fSub = myInsDoc('Clear queries',f,'S','/pdb/queries/clearqueries.do'); |
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| 279 |
} |
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| 280 |
|
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| 281 |
</script> |
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| 282 |
|
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| 283 |
<script type="text/javascript" language="JavaScript"> |
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| 284 |
var roboLoc = "/robohelp/"; |
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| 285 |
</script> |
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| 286 |
</head> |
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| 287 |
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| 288 |
<body bgcolor="#ffffff" style="margin:10px 10px 10px 10px;" onload="liveSearchInit();pdbBodyLoadInit();"> |
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| 289 |
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| 290 |
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| 291 |
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| 292 |
<iframe src="/pdb/browse/menu_empty.html" name="retriever" id="retriever" width="100%" height="1" frameborder="0"> |
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| 293 |
<p> </p> |
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| 294 |
</iframe> |
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| 295 |
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| 296 |
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| 297 |
<table border="0" cellpadding="0" cellspacing="0" align="center" > |
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| 298 |
<tbody> |
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| 299 |
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| 300 |
<tr> |
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<td colspan="3"> |
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<script language="Javascript" type="text/javascript"> |
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| 309 |
function checkSequenceLength() |
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| 310 |
{ |
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| 311 |
if ((document.headerQueryForm.inputQuickSearch.value.substr(0,9) == 'sequence:')&&(document.headerQueryForm.inputQuickSearch.value.length < 15)) |
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| 312 |
{ |
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| 313 |
alert('Sequence searches must be at least 6 characters long'); |
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| 314 |
return false; |
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| 315 |
} |
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| 316 |
else |
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| 317 |
return liveSearchSubmit(); |
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| 318 |
|
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| 319 |
} |
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| 320 |
|
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| 321 |
</script> |
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| 322 |
<form action="/pdb/search/navbarsearch.do" onSubmit="return checkSequenceLength();" method="get" name="headerQueryForm"> |
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| 323 |
<table border="0" cellpadding="0" cellspacing="0" width="100%"> |
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| 324 |
<tr> |
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| 325 |
<td width="210"><a href="/pdb"><img alt="RCSB PDB Protein Data Bank | Home" title="RCSB PDB Protein Data Bank | Home" src="/pdb/skins/pastel/images/header/pdblogo.gif" width="198" border="0"></a></td> |
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| 326 |
<td align="right" class="headertop" colspan="2"> |
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As of <a href="/pdb/search/smartSubquery.do?smartSearchSubtype=LastLoadQuery">Tuesday Dec 26, 2006</a> <a href="/pdb/rss/LastLoad" title="RSS Feed for the Latest Released Structures"><img alt="RSS Feed for the Latest Released Structures" border="0" src="/pdbstatic/images/feed-icon16x16.png"></a> |
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there are 40870 Structures |
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function searchCitationAuthor(author, primary) |
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if (primary) |
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| 571 |
{ |
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| 572 |
document.ecQueryForm.elements['entity.pdbx_ec.value'].value = ec; |
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document.ecQueryForm.elements['entity.pdbx_ec.comparator'].value = "="; |
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document.ecQueryForm.submit(); |
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| 578 |
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| 579 |
document.sgQueryForm.elements['symmetry.space_group_name_H-M.comparator'].value = "="; |
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function searchSource(natSci, natCommon, genSci, genCommon) |
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document.srcQueryForm.elements['entity_src_gen.gene_src_common_name.value'].value = genCommon; |
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| 589 |
document.srcQueryForm.submit(); |
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<script type="text/javascript" language="JavaScript"> |
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function queryByExample(s, t) |
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{ |
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<span class="se_pagetitle">1CY0 </span> |
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| 635 |
<a href="/pdb/files/1cy0.pdb" title="Display PDB file" target="_blank"><img src="/pdbstatic/images/summary.jpg" alt="Display PDB file" border='0'></a> |
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| 636 |
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<table cellpadding="5" cellspacing="5" border="0" style="text-align: left; width: 100%;"> |
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<tr class="se_back1"> |
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<td width="15%" align="right" valign="top" class="se_item"> |
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Title |
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| 646 |
</td> |
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| 647 |
<td width="85%" valign="top" class="se_datalarge1"> |
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| 648 |
|
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| 649 |
COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 3'-5'-ADENOSINE DIPHOSPHATE |
|---|
| 650 |
|
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| 651 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="StructureTitle"> |
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Authors |
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<input type="hidden" name="smartSearchSubtype" value="AuthorQuery"> |
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<input type="hidden" name="display" value="true"> |
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<a class="seAuthors" onmouseover="this.className='seAuthorsHover';" onmouseout="this.className='seAuthors';" onclick="searchStructureAuthor('Feinberg, H.');">Feinberg, H.</a>, <a class="seAuthors" onmouseover="this.className='seAuthorsHover';" onmouseout="this.className='seAuthors';" onclick="searchStructureAuthor('Changela, A.');">Changela, A.</a>, <a class="seAuthors" onmouseover="this.className='seAuthorsHover';" onmouseout="this.className='seAuthors';" onclick="searchStructureAuthor('Mondragon, A.');">Mondragon, A.</a> |
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| 664 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="StructureExperimentAuthors"> |
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</form> |
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<form action="/pdb/search/smartSubquery.do" method="get" name="queryCitationAuthorForm"> |
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<input type="hidden" name="citation_author.name.value" value=""> |
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Primary Citation |
|---|
| 678 |
</td> |
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| 679 |
<td width="85%" class="se_datasmall1"> |
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| 680 |
<a class="sePrimarycitations" onmouseover="this.className='sePrimarycitationsHover';" onmouseout="this.className='sePrimarycitations';" onclick="searchCitationAuthor('Feinberg, H.', true);">Feinberg, H.</a>, <a class="sePrimarycitations" onmouseover="this.className='sePrimarycitationsHover';" onmouseout="this.className='sePrimarycitations';" onclick="searchCitationAuthor('Changela, A.', true);">Changela, A.</a>, <a class="sePrimarycitations" onmouseover="this.className='sePrimarycitationsHover';" onmouseout="this.className='sePrimarycitations';" onclick="searchCitationAuthor('Mondragon, A.', true);">Mondragon, A.</a> |
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| 681 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="CitationArticleAuthors"> |
|---|
| 682 |
|
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| 683 |
Protein-nucleotide interactions in E. coli DNA topoisomerase I. |
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| 684 |
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| 685 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="CitationArticleTitle"> |
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| 686 |
|
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| 687 |
<span class="se_journal">Nat.Struct.Biol.</span> |
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| 688 |
|
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| 689 |
|
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| 690 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="CitationJournalName"> |
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| 691 |
|
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| 692 |
<span class="se_journal">v6</span> |
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| 693 |
|
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| 694 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="CitationJournalVolume"> |
|---|
| 695 |
|
|---|
| 696 |
<span class="se_journal">pp.961-968</span> |
|---|
| 697 |
|
|---|
| 698 |
, |
|---|
| 699 |
<span class="se_journal">1999</span> |
|---|
| 700 |
|
|---|
| 701 |
|
|---|
| 702 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="CitationJournalYear"> |
|---|
| 703 |
|
|---|
| 704 |
|
|---|
| 705 |
<br> |
|---|
| 706 |
[ <a class="se_datalarge" href="/pdb/explore/pubmed.do?structureId=1CY0" name="Abstract" ALT="View Searchable PubMed Abstract" TITLE="View Searchable PubMed Abstract">Abstract</a> ] |
|---|
| 707 |
<a class="se_datalarge" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Abstract&list_uids=10504732" target="resource_window"> |
|---|
| 708 |
<img src="/pdbstatic/explorer/images/abstract_icon.gif" BORDER="0" ALT="View PubMed Abstract at NCBI" TITLE="View PubMed Abstract at NCBI"> |
|---|
| 709 |
|
|---|
| 710 |
</td> |
|---|
| 711 |
</tr> |
|---|
| 712 |
<tr class="se_back2"> |
|---|
| 713 |
<td width="15%" align="right" class="se_item"> |
|---|
| 714 |
History |
|---|
| 715 |
</td> |
|---|
| 716 |
<td width="85%" class="se_datalarge2"> |
|---|
| 717 |
<span class="se_subitem">Deposition </span> |
|---|
| 718 |
1999-08-31 |
|---|
| 719 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="DepositionDate"> |
|---|
| 720 |
|
|---|
| 721 |
<span class="se_subitem"> Release </span> |
|---|
| 722 |
2000-03-08 |
|---|
| 723 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="ReleaseDate"> |
|---|
| 724 |
|
|---|
| 725 |
</td> |
|---|
| 726 |
</tr> |
|---|
| 727 |
<tr class="se_back1"> |
|---|
| 728 |
<td width="15%" align="right" class="se_item"> |
|---|
| 729 |
Experimental Method |
|---|
| 730 |
</td> |
|---|
| 731 |
<td width="85%" class="se_datalarge1"> |
|---|
| 732 |
<span class="se_subitem">Type </span> |
|---|
| 733 |
X-RAY DIFFRACTION |
|---|
| 734 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt=""> |
|---|
| 735 |
<span class="se_subitem">Data</span> |
|---|
| 736 |
|
|---|
| 737 |
|
|---|
| 738 |
<a class="se_datasmall1">N/A</a> |
|---|
| 739 |
|
|---|
| 740 |
|
|---|
| 741 |
|
|---|
| 742 |
</td></tr> |
|---|
| 743 |
|
|---|
| 744 |
|
|---|
| 745 |
<tr class="se_back2"> |
|---|
| 746 |
<td width="15%" align="right" class="se_item"> |
|---|
| 747 |
Parameters |
|---|
| 748 |
</td> |
|---|
| 749 |
<td width="85%" class="se_datalarge2"> |
|---|
| 750 |
|
|---|
| 751 |
<form action="/pdb/search/smartSubquery.do" method="get" name="sgQueryForm"> |
|---|
| 752 |
<input type="hidden" name="smartSearchSubtype" value="SpaceGroupQuery"> |
|---|
| 753 |
<input type="hidden" name="display" value="true"> |
|---|
| 754 |
<input type="hidden" name="symmetry.space_group_name_H-M.value" value=""> |
|---|
| 755 |
<input type="hidden" name="symmetry.space_group_name_H-M.comparator" value="="> |
|---|
| 756 |
|
|---|
| 757 |
<table border="0" cellpadding="1" cellspacing="1" width="100%"> |
|---|
| 758 |
<tr class="se_subitem2"> |
|---|
| 759 |
<td width="20%"> |
|---|
| 760 |
Resolution[Å] |
|---|
| 761 |
<a href='/pdb/statistics/histogram.do?mdcat=refine&mditem=ls_d_res_high&minLabel=0&maxLabel=5&numOfbars=10'> |
|---|
| 762 |
<img src='/pdbstatic/images/histogram16x16.jpg' border=0 title='View a histogram of Resolution' alt='View a histogram of Resolution'> |
|---|
| 763 |
</a> |
|---|
| 764 |
</td> |
|---|
| 765 |
<td width="20%"> |
|---|
| 766 |
R-Value |
|---|
| 767 |
</td> |
|---|
| 768 |
<td width="20%"> |
|---|
| 769 |
R-Free |
|---|
| 770 |
<td width="25%"> |
|---|
| 771 |
Space Group |
|---|
| 772 |
</td> |
|---|
| 773 |
</tr> |
|---|
| 774 |
<tr class="se_subitem2"> |
|---|
| 775 |
<td width="20%" class="se_datalarge2"> |
|---|
| 776 |
2.45 |
|---|
| 777 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="Resolution"> |
|---|
| 778 |
</td> |
|---|
| 779 |
<td width="20%" align="left" class="se_datalarge2"> |
|---|
| 780 |
0.220 |
|---|
| 781 |
(obs.) |
|---|
| 782 |
</td> |
|---|
| 783 |
<td width="20%" align="left" class="se_datalarge2"> |
|---|
| 784 |
0.274 |
|---|
| 785 |
|
|---|
| 786 |
</td> |
|---|
| 787 |
<td width="25%" class="se_datalarge2"> |
|---|
| 788 |
|
|---|
| 789 |
<a class="se_datasmall" onclick="searchSpaceGroup('P 21 21 21');" onmouseover="this.className='se_datasmallHover'" onmouseout="this.className='se_datasmall'"> |
|---|
| 790 |
P 2<sub>1</sub> 2<sub>1</sub> 2<sub>1</sub> |
|---|
| 791 |
</a> |
|---|
| 792 |
|
|---|
| 793 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="SpaceGroup"> |
|---|
| 794 |
</td> |
|---|
| 795 |
</tr> |
|---|
| 796 |
</table> |
|---|
| 797 |
</form> |
|---|
| 798 |
</td> |
|---|
| 799 |
</tr> |
|---|
| 800 |
<tr class="se_back1"> |
|---|
| 801 |
<td width="15%" align="right" class="se_item"> |
|---|
| 802 |
Unit Cell |
|---|
| 803 |
</td> |
|---|
| 804 |
<td width="85%" class="se_datalarge1" valign="top"> |
|---|
| 805 |
<table border="0" cellpadding="1" cellspacing="1" width="100%"> |
|---|
| 806 |
<tr class="se_subitem1"> |
|---|
| 807 |
<td width="20%"> |
|---|
| 808 |
<span class="se_unitcellitem">Length [Å]</span> |
|---|
| 809 |
</td> |
|---|
| 810 |
<td width="13%"> |
|---|
| 811 |
a |
|---|
| 812 |
</td> |
|---|
| 813 |
<td width="13%" > |
|---|
| 814 |
|
|---|
| 815 |
<span class="se_datasmall1">63.04</span> |
|---|
| 816 |
|
|---|
| 817 |
</td> |
|---|
| 818 |
<td width="13%" > |
|---|
| 819 |
b |
|---|
| 820 |
</td> |
|---|
| 821 |
<td width="13%"> |
|---|
| 822 |
|
|---|
| 823 |
<span class="se_datasmall1">73.31</span> |
|---|
| 824 |
|
|---|
| 825 |
</td> |
|---|
| 826 |
<td width="13%" > |
|---|
| 827 |
c |
|---|
| 828 |
</td> |
|---|
| 829 |
<td width="15%" > |
|---|
| 830 |
|
|---|
| 831 |
<span class="se_datasmall1">134.46</span> |
|---|
| 832 |
|
|---|
| 833 |
</td> |
|---|
| 834 |
</tr> |
|---|
| 835 |
<tr class="se_subitem1"> |
|---|
| 836 |
<td width="20%"> |
|---|
| 837 |
<span class="se_unitcellitem">Angles [°]</span> |
|---|
| 838 |
</td> |
|---|
| 839 |
<td width="13%" > |
|---|
| 840 |
alpha |
|---|
| 841 |
</td> |
|---|
| 842 |
<td width="13%" > |
|---|
| 843 |
|
|---|
| 844 |
<span class="se_datasmall1">90.00</span> |
|---|
| 845 |
|
|---|
| 846 |
</td> |
|---|
| 847 |
<td width="13%"> |
|---|
| 848 |
beta |
|---|
| 849 |
</td> |
|---|
| 850 |
<td width="13%" > |
|---|
| 851 |
|
|---|
| 852 |
<span class="se_datasmall1">90.00</span> |
|---|
| 853 |
|
|---|
| 854 |
</td> |
|---|
| 855 |
<td width="13%" > |
|---|
| 856 |
gamma |
|---|
| 857 |
</td> |
|---|
| 858 |
<td width="15%" > |
|---|
| 859 |
|
|---|
| 860 |
<span class="se_datasmall1">90.00</span> |
|---|
| 861 |
|
|---|
| 862 |
</td> |
|---|
| 863 |
</tr> |
|---|
| 864 |
</table> |
|---|
| 865 |
</td> |
|---|
| 866 |
</tr> |
|---|
| 867 |
|
|---|
| 868 |
|
|---|
| 869 |
<tr class="se_back2"> |
|---|
| 870 |
<td width="15%" align="right" valign="top" class="se_item"> |
|---|
| 871 |
Molecular Description Asymmetric Unit |
|---|
| 872 |
</td> |
|---|
| 873 |
<td width="85%" class="se_datalarge2" valign="top"> |
|---|
| 874 |
|
|---|
| 875 |
<form action="/pdb/search/smartSubquery.do" method="get" name="ecQueryForm"> |
|---|
| 876 |
<input type="hidden" name="smartSearchSubtype" value="EnzymeClassificationQuery"> |
|---|
| 877 |
<input type="hidden" name="display" value="true"> |
|---|
| 878 |
<input type="hidden" name="entity.pdbx_ec.value" value=""> |
|---|
| 879 |
<input type="hidden" name="entity.pdbx_ec.comparator" value="="> |
|---|
| 880 |
|
|---|
| 881 |
|
|---|
| 882 |
|
|---|
| 883 |
|
|---|
| 884 |
<span class="se_subitem"><br>Polymer:</span> 1 |
|---|
| 885 |
<span class="se_subitem">Molecule:</span> DNA TOPOISOMERASE I |
|---|
| 886 |
<span class="se_subitem">Fragment:</span> 67 KDA N-TERMINAL FRAGMENT OF E.COLI TOPOISOMERASE I |
|---|
| 887 |
<span class="se_subitem">Chains:</span> A |
|---|
| 888 |
<span class="se_subitem">EC no.:</span> <a class="se_datasmall" onclick="searchEc('5.99.1.2');" onmouseover="this.className='se_datasmallHover'" onmouseout="this.className='se_datasmall'">5.99.1.2</a> <a class="se_datalarge" href="http://www.chem.qmul.ac.uk/iubmb/enzyme/EC5/99/1/2.html" target="resource_window"><img src="/pdbstatic/explorer/images/iubmb_icon.gif" BORDER="0" ALT="Go to IUBMB EC entry" TITLE="Go to IUBMB EC entry"></a> |
|---|
| 889 |
|
|---|
| 890 |
</form> |
|---|
| 891 |
|
|---|
| 892 |
|
|---|
| 893 |
<form action="/pdb/search/smartSubquery.do" method="get" name="queryKeywordsForm"> |
|---|
| 894 |
<input type="hidden" name="smartSearchSubtype" value="StructureKeywordsQuery"> |
|---|
| 895 |
<input type="hidden" name="display" value="true"> |
|---|
| 896 |
<input type="hidden" name="struct_keywords.pdbx_keywords.value" value=""> |
|---|
| 897 |
<input type="hidden" name="struct_keywords.pdbx_keywords.comparator" value="startswith"> |
|---|
| 898 |
</form> |
|---|
| 899 |
|
|---|
| 900 |
|
|---|
| 901 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="Compound"> |
|---|
| 902 |
</td> |
|---|
| 903 |
</tr> |
|---|
| 904 |
<tr class="se_back1"> |
|---|
| 905 |
<td width="15%" align="right" valign="top" class="se_item"> |
|---|
| 906 |
Classification |
|---|
| 907 |
</td> |
|---|
| 908 |
<td width="40%" class="se_datalarge1"> |
|---|
| 909 |
|
|---|
| 910 |
<span class="qrb_value"> |
|---|
| 911 |
<a class="sePrimarycitations" onmouseover="this.className='sePrimarycitationsHover';" onmouseout="this.className='sePrimarycitations';" onclick="searchPdbxKeyword('ISOMERASE');"> |
|---|
| 912 |
Isomerase |
|---|
| 913 |
</a> |
|---|
| 914 |
</span> |
|---|
| 915 |
|
|---|
| 916 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="StructureSummary"> |
|---|
| 917 |
|
|---|
| 918 |
</td> |
|---|
| 919 |
</tr> |
|---|
| 920 |
</tbody> |
|---|
| 921 |
</table> |
|---|
| 922 |
</td> |
|---|
| 923 |
<td style="vertical-align: top; text-align: right; width: 250px;"> |
|---|
| 924 |
|
|---|
| 925 |
|
|---|
| 926 |
|
|---|
| 927 |
|
|---|
| 928 |
|
|---|
| 929 |
|
|---|
| 930 |
|
|---|
| 931 |
|
|---|
| 932 |
|
|---|
| 933 |
|
|---|
| 934 |
|
|---|
| 935 |
<script type="text/javascript" language="JavaScript"> |
|---|
| 936 |
|
|---|
| 937 |
var isImage = "bio"; |
|---|
| 938 |
function switchStructureImage() |
|---|
| 939 |
{ |
|---|
| 940 |
if (isImage == "bio") { |
|---|
| 941 |
document.switchImageForm.structureImageButton.value = "Asymmetric Unit"; |
|---|
| 942 |
document.switchImageForm.structureImage.src = '/pdb/images/1cy0_asym_r_250.jpg'; |
|---|
| 943 |
isImage = "asym"; |
|---|
| 944 |
} |
|---|
| 945 |
else { |
|---|
| 946 |
document.switchImageForm.structureImageButton.value = "Biological Molecule"; |
|---|
| 947 |
|
|---|
| 948 |
document.switchImageForm.structureImage.src = '/pdb/images/1cy0_bio_r_250.jpg'; |
|---|
| 949 |
isImage = "bio"; |
|---|
| 950 |
} |
|---|
| 951 |
} |
|---|
| 952 |
</script> |
|---|
| 953 |
|
|---|
| 954 |
|
|---|
| 955 |
|
|---|
| 956 |
<form name="switchImageForm" action=""> |
|---|
| 957 |
|
|---|
| 958 |
|
|---|
| 959 |
<table border="0" cellpadding="0" cellspacing="0" width="256"> |
|---|
| 960 |
<tr class="homedark"> |
|---|
| 961 |
<td class="putih4"> Images and Visualization</td> |
|---|
| 962 |
<td align="right" valign="top"><img |
|---|
| 963 |
src="/pdbstatic/home/tablecorner.gif" alt="" border="0"></td> |
|---|
| 964 |
</tr> |
|---|
| 965 |
<tr> |
|---|
| 966 |
<td colspan="2"> |
|---|
| 967 |
<table border="0" cellpadding="1" cellspacing="0" width="100%" |
|---|
| 968 |
class="homedark"> |
|---|
| 969 |
<tr> |
|---|
| 970 |
<td> |
|---|
| 971 |
<table border="0" cellpadding="1" cellspacing="0" width="100%" |
|---|
| 972 |
class="homewhite"> |
|---|
| 973 |
|
|---|
| 974 |
|
|---|
| 975 |
|
|---|
| 976 |
|
|---|
| 977 |
|
|---|
| 978 |
|
|---|
| 979 |
<tr> |
|---|
| 980 |
<td align="center"><font size="2" face="Arial, Arial, Helvetica">Biological |
|---|
| 981 |
Molecule / Asymmetric Unit</font></td> |
|---|
| 982 |
</tr> |
|---|
| 983 |
<tr> |
|---|
| 984 |
<td align="center"><img id="structureImage" name="structureImage" |
|---|
| 985 |
src="/pdb/images/1cy0_asym_r_250.jpg" border="0" |
|---|
| 986 |
alt="Biological Molecule / Asymmetric Unit Image for 1CY0"> |
|---|
| 987 |
</td> |
|---|
| 988 |
</tr> |
|---|
| 989 |
|
|---|
| 990 |
<tr> |
|---|
| 991 |
<td align="center" class="it_item"> |
|---|
| 992 |
<table> |
|---|
| 993 |
<tr> |
|---|
| 994 |
<td class="it_item" colspan="4" align="center">Display Options</td> |
|---|
| 995 |
</tr> |
|---|
| 996 |
<tr> |
|---|
| 997 |
<td align="center"><a class="imagetable" |
|---|
| 998 |
href="/pdb/static.do?p=explorer/viewers/king.jsp" |
|---|
| 999 |
title="KiNG requires Java">KiNG</a></td> |
|---|
| 1000 |
</tr> |
|---|
| 1001 |
<tr> |
|---|
| 1002 |
<td align="center"><a class="imagetable" |
|---|
| 1003 |
href="/pdb/static.do?p=explorer/viewers/jmol.jsp" |
|---|
| 1004 |
title="Jmol requires Java">Jmol</a></td> |
|---|
| 1005 |
</tr> |
|---|
| 1006 |
<tr> |
|---|
| 1007 |
<td align="center"><a class="imagetable" |
|---|
| 1008 |
href="/pdb/static.do?p=explorer/viewers/webmol.jsp" |
|---|
| 1009 |
title="WebMol requires Java">WebMol</a></td> |
|---|
| 1010 |
</tr> |
|---|
| 1011 |
<tr> |
|---|
| 1012 |
<td align="center"><a class="imagetable" |
|---|
| 1013 |
href="/pdb/Viewers/ProteinWorkshop/protein_workshop_launch.jsp" |
|---|
| 1014 |
title="ProteinWorkshop requires Java">Protein Workshop</a></td> |
|---|
| 1015 |
</tr> |
|---|
| 1016 |
<tr><td align="center"><a class="imagetable" href="/pdb/static.do?p=Viewers/QuickPDB/quickPDBApplet.jsp" title="QuickPDB requires Java">QuickPDB</a></td></tr> |
|---|
| 1017 |
<tr> |
|---|
| 1018 |
<td align="center"><a class="imagetable" |
|---|
| 1019 |
href="/pdb/explore/images.do?structureId=1CY0">All |
|---|
| 1020 |
Images</a></td> |
|---|
| 1021 |
</tr> |
|---|
| 1022 |
|
|---|
| 1023 |
|
|---|
| 1024 |
|
|---|
| 1025 |
|
|---|
| 1026 |
|
|---|
| 1027 |
|
|---|
| 1028 |
|
|---|
| 1029 |
|
|---|
| 1030 |
|
|---|
| 1031 |
|
|---|
| 1032 |
</table> |
|---|
| 1033 |
</td> |
|---|
| 1034 |
</tr> |
|---|
| 1035 |
|
|---|
| 1036 |
|
|---|
| 1037 |
</table> |
|---|
| 1038 |
</td> |
|---|
| 1039 |
|
|---|
| 1040 |
</tr> |
|---|
| 1041 |
</table> |
|---|
| 1042 |
</td> |
|---|
| 1043 |
</tr> |
|---|
| 1044 |
</table> |
|---|
| 1045 |
|
|---|
| 1046 |
</form> |
|---|
| 1047 |
|
|---|
| 1048 |
</td> |
|---|
| 1049 |
</tr> |
|---|
| 1050 |
</tbody> |
|---|
| 1051 |
</table> |
|---|
| 1052 |
|
|---|
| 1053 |
|
|---|
| 1054 |
<table border="0" cellpadding="4" cellspacing="4" width="100%"> |
|---|
| 1055 |
<tr class="se_back2"> |
|---|
| 1056 |
<td width="15%" align="right" valign="top" class="se_item"> |
|---|
| 1057 |
Source |
|---|
| 1058 |
<form action="/pdb/search/smartSubquery.do" method="get" name="srcQueryForm"> |
|---|
| 1059 |
|
|---|
| 1060 |
<input type="hidden" name="smartSearchSubtype" value="CifFieldsQuery"> |
|---|
| 1061 |
<input type="hidden" name="entity_src_nat.pdbx_organism_scientific.value" value=""> |
|---|
| 1062 |
<input type="hidden" name="entity_src_nat.common_name.value" value=""> |
|---|
| 1063 |
<input type="hidden" name="entity_src_gen.pdbx_gene_src_scientific_name.value" value=""> |
|---|
| 1064 |
<input type="hidden" name="entity_src_gen.gene_src_common_name.value" value=""> |
|---|
| 1065 |
</form> |
|---|
| 1066 |
</td> |
|---|
| 1067 |
<td width="85%" class="se_datalarge2" valign="top"> |
|---|
| 1068 |
|
|---|
| 1069 |
<span class="se_subitem">Polymer:</span> |
|---|
| 1070 |
1 |
|---|
| 1071 |
<span class="se_subitem">Scientific Name:</span> |
|---|
| 1072 |
<span class="qrb_value"> |
|---|
| 1073 |
<a class="sePrimarycitations" onmouseover="this.className='sePrimarycitationsHover';" onmouseout="this.className='sePrimarycitations';" onclick="searchSource('', '', 'ESCHERICHIA COLI', '');"> |
|---|
| 1074 |
Escherichia coli |
|---|
| 1075 |
</a> |
|---|
| 1076 |
</span> |
|---|
| 1077 |
<a class="se_datalarge" href="http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=562" target="resource_window"><img src="/pdbstatic/explorer/images/taxonomy_icon.gif" BORDER="0" ALT="Go to NCBI Taxonomy entry" TITLE="Go to NCBI Taxonomy entry"></a> |
|---|
| 1078 |
|
|---|
| 1079 |
<span class="se_subitem">Common Name:</span> |
|---|
| 1080 |
<span class="qrb_value"> |
|---|
| 1081 |
<a class="sePrimarycitations" onmouseover="this.className='sePrimarycitationsHover';" onmouseout="this.className='sePrimarycitations';" onclick="searchSource('', '', '', 'BACTERIA');"> |
|---|
| 1082 |
Bacteria |
|---|
| 1083 |
</a> |
|---|
| 1084 |
</span> |
|---|
| 1085 |
|
|---|
| 1086 |
<span class="se_subitem">Expression system:</span> |
|---|
| 1087 |
<span class="qrb_value"> |
|---|
| 1088 |
<a class="sePrimarycitations" onmouseover="this.className='sePrimarycitationsHover';" onmouseout="this.className='sePrimarycitations';" onclick="searchSource('', '', 'ESCHERICHIA COLI', '');"> |
|---|
| 1089 |
Escherichia coli |
|---|
| 1090 |
</a> |
|---|
| 1091 |
</span> |
|---|
| 1092 |
|
|---|
| 1093 |
|
|---|
| 1094 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="Source"> |
|---|
| 1095 |
</td> |
|---|
| 1096 |
</tr> |
|---|
| 1097 |
|
|---|
| 1098 |
<tr class="se_back1"> |
|---|
| 1099 |
<td width="15%" align="right" class="se_item"> |
|---|
| 1100 |
Related PDB Entries |
|---|
| 1101 |
</td> |
|---|
| 1102 |
<td width="85%" class="se_datalarge1"> |
|---|
| 1103 |
<table border="0" cellpadding="1" cellspacing="1" width="100%"> |
|---|
| 1104 |
<tr> |
|---|
| 1105 |
<td width="20%"> |
|---|
| 1106 |
<span class="se_subitem">Id</span> |
|---|
| 1107 |
</td> |
|---|
| 1108 |
<td width="80%"> |
|---|
| 1109 |
<span class="se_subitem">Details</span> |
|---|
| 1110 |
</td> |
|---|
| 1111 |
</tr> |
|---|
| 1112 |
|
|---|
| 1113 |
<tr> |
|---|
| 1114 |
<td width="15%" class="se_datalarge1"> |
|---|
| 1115 |
<a class="se_datalarge" href="/pdb/explore.do?structureId=1CYY" >1CYY</a> |
|---|
| 1116 |
</td> |
|---|
| 1117 |
<td width="65%" class="se_datalarge1"> |
|---|
| 1118 |
Crystal structure of the 30 kDa fragment of E. coli DNA topoisomerase I. Hexagonal form |
|---|
| 1119 |
</td> |
|---|
| 1120 |
</tr> |
|---|
| 1121 |
|
|---|
| 1122 |
<tr> |
|---|
| 1123 |
<td width="15%" class="se_datalarge1"> |
|---|
| 1124 |
<a class="se_datalarge" href="/pdb/explore.do?structureId=1CY9" >1CY9</a> |
|---|
| 1125 |
</td> |
|---|
| 1126 |
<td width="65%" class="se_datalarge1"> |
|---|
| 1127 |
Crystal structure of the 30 kDa fragment of E. coli DNA topoisomerase I. Monoclinic form |
|---|
| 1128 |
</td> |
|---|
| 1129 |
</tr> |
|---|
| 1130 |
|
|---|
| 1131 |
<tr> |
|---|
| 1132 |
<td width="15%" class="se_datalarge1"> |
|---|
| 1133 |
<a class="se_datalarge" href="/pdb/explore.do?structureId=1CY8" >1CY8</a> |
|---|
| 1134 |
</td> |
|---|
| 1135 |
<td width="65%" class="se_datalarge1"> |
|---|
| 1136 |
Complex of E.coli DNA topoisomerase I with 5'-thymidine monophosphate and 3'-thymidine monophosphate |
|---|
| 1137 |
</td> |
|---|
| 1138 |
</tr> |
|---|
| 1139 |
|
|---|
| 1140 |
<tr> |
|---|
| 1141 |
<td width="15%" class="se_datalarge1"> |
|---|
| 1142 |
<a class="se_datalarge" href="/pdb/explore.do?structureId=1CY7" >1CY7</a> |
|---|
| 1143 |
</td> |
|---|
| 1144 |
<td width="65%" class="se_datalarge1"> |
|---|
| 1145 |
Complex of E.coli DNA topoisomerase I with 5'-thymidine monophosphate |
|---|
| 1146 |
</td> |
|---|
| 1147 |
</tr> |
|---|
| 1148 |
|
|---|
| 1149 |
<tr> |
|---|
| 1150 |
<td width="15%" class="se_datalarge1"> |
|---|
| 1151 |
<a class="se_datalarge" href="/pdb/explore.do?structureId=1CY6" >1CY6</a> |
|---|
| 1152 |
</td> |
|---|
| 1153 |
<td width="65%" class="se_datalarge1"> |
|---|
| 1154 |
Complex of E.coli DNA topoisomerase I with 3'-thymidine monophosphate |
|---|
| 1155 |
</td> |
|---|
| 1156 |
</tr> |
|---|
| 1157 |
|
|---|
| 1158 |
<tr> |
|---|
| 1159 |
<td width="15%" class="se_datalarge1"> |
|---|
| 1160 |
<a class="se_datalarge" href="/pdb/explore.do?structureId=1CY4" >1CY4</a> |
|---|
| 1161 |
</td> |
|---|
| 1162 |
<td width="65%" class="se_datalarge1"> |
|---|
| 1163 |
Complex of E.coli DNA topoisomerase I with 5'pTpTpTp3' |
|---|
| 1164 |
</td> |
|---|
| 1165 |
</tr> |
|---|
| 1166 |
|
|---|
| 1167 |
<tr> |
|---|
| 1168 |
<td width="15%" class="se_datalarge1"> |
|---|
| 1169 |
<a class="se_datalarge" href="/pdb/explore.do?structureId=1CY2" >1CY2</a> |
|---|
| 1170 |
</td> |
|---|
| 1171 |
<td width="65%" class="se_datalarge1"> |
|---|
| 1172 |
Complex of E.coli DNA topoisomerase I with TpTpTp3' |
|---|
| 1173 |
</td> |
|---|
| 1174 |
</tr> |
|---|
| 1175 |
|
|---|
| 1176 |
<tr> |
|---|
| 1177 |
<td width="15%" class="se_datalarge1"> |
|---|
| 1178 |
<a class="se_datalarge" href="/pdb/explore.do?structureId=1CY1" >1CY1</a> |
|---|
| 1179 |
</td> |
|---|
| 1180 |
<td width="65%" class="se_datalarge1"> |
|---|
| 1181 |
COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 5'pTpTpT |
|---|
| 1182 |
</td> |
|---|
| 1183 |
</tr> |
|---|
| 1184 |
|
|---|
| 1185 |
</table> |
|---|
| 1186 |
</td> |
|---|
| 1187 |
</tr> |
|---|
| 1188 |
|
|---|
| 1189 |
|
|---|
| 1190 |
|
|---|
| 1191 |
<tr class="se_back2"> |
|---|
| 1192 |
<td width="15%" align="right" valign="top" class="se_item"> |
|---|
| 1193 |
Chemical Component |
|---|
| 1194 |
</td> |
|---|
| 1195 |
<td width="85%" valign="top"> |
|---|
| 1196 |
<table border="0" cellpadding="1" cellspacing="1" width="100%" > |
|---|
| 1197 |
<tr class="se_subitem2"> |
|---|
| 1198 |
<td width="10%"> |
|---|
| 1199 |
Identifier |
|---|
| 1200 |
</td> |
|---|
| 1201 |
<td width="35%"> |
|---|
| 1202 |
Name |
|---|
| 1203 |
</td> |
|---|
| 1204 |
<td width="25%"> |
|---|
| 1205 |
Formula |
|---|
| 1206 |
</td> |
|---|
| 1207 |
<td width="20%"> |
|---|
| 1208 |
Drug Similarity |
|---|
| 1209 |
</td> |
|---|
| 1210 |
<td width="20%"> |
|---|
| 1211 |
Ligand Structure |
|---|
| 1212 |
</td> |
|---|
| 1213 |
|
|---|
| 1214 |
<td width="20%"> |
|---|
| 1215 |
Ligand Interaction |
|---|
| 1216 |
</td> |
|---|
| 1217 |
|
|---|
| 1218 |
<td> |
|---|
| 1219 |
<form action="/pdb/search/smartSubquery.do" method="get" name="ligandQueryForm"> |
|---|
| 1220 |
<input type="hidden" name="smartSearchSubtype" value="LigandIdQuery"> |
|---|
| 1221 |
<input type="hidden" name="display" value="true"> |
|---|
| 1222 |
<input type="hidden" name="chem_comp.id.value" value=""> |
|---|
| 1223 |
<input type="hidden" name="chem_comp.id.comparator" value="="> |
|---|
| 1224 |
</form> |
|---|
| 1225 |
</td> |
|---|
| 1226 |
</tr> |
|---|
| 1227 |
|
|---|
| 1228 |
|
|---|
| 1229 |
<tr> |
|---|
| 1230 |
<td width="5%" class="se_datalarge2" valign="middle"> |
|---|
| 1231 |
<a class="se_datalarge" onclick="searchLigand('A3P');" onmouseover="this.className='se_datalargeHover'" onmouseout="this.className='se_datalarge'">A3P</a> |
|---|
| 1232 |
<img src="/pdbstatic/explorer/images/spacer.gif" alt="" name="NonPolymerEntities"> |
|---|
| 1233 |
</td> |
|---|
| 1234 |
<td width="30%" class="se_datalarge2"> |
|---|
| 1235 |
ADENOSINE-3'-5'-DIPHOSPHATE |
|---|
| 1236 |
</td> |
|---|
| 1237 |
<td width="20%" class="se_formula2"> |
|---|
| 1238 |
C<sub>1</sub><sub>0</sub> H<sub>1</sub><sub>5</sub> N<sub>5</sub> O<sub>1</sub><sub>0</sub> P<sub>2</sub> |
|---|
| 1239 |
</td> |
|---|
| 1240 |
<td width="10%" class="se_datalarge2"> |
|---|
| 1241 |
<a class="se_datasmall" href="http://bioinformatics.charite.de/superligands/drug_similarity.php?hetero=A3P" target=resource_window> |
|---|
| 1242 |
[ View ] |
|---|
| 1243 |
</a> |
|---|
| 1244 |
</td> |
|---|
| 1245 |
<td width="15%" class="se_datalarge2"> |
|---|
| 1246 |
<a class="se_datasmall" href="/pdb/explore/marvin.do?handler=structureExplorer&hetId=A3P&sid=1CY0"> |
|---|
| 1247 |
[ View ] |
|---|
| 1248 |
</a> |
|---|
| 1249 |
</td> |
|---|
| 1250 |
|
|---|
| 1251 |
<td width="20%" class="se_datalarge2"> |
|---|
| 1252 |
<a class="se_datasmall" href="/pdb/explore/ligand3d.jnlp?hetId=A3P"> |
|---|
| 1253 |
[ View ] |
|---|
| 1254 |
</a> |
|---|
| 1255 |
</td> |
|---|
| 1256 |
|
|---|
| 1257 |
</tr> |
|---|
| 1258 |
|
|---|
| 1259 |
|
|---|
| 1260 |
</table> |
|---|
| 1261 |
</td> |
|---|
| 1262 |
</tr> |
|---|
| 1263 |
|
|---|
| 1264 |
|
|---|
| 1265 |
|
|---|
| 1266 |
<tr class="se_back1"> |
|---|
| 1267 |
<td width="15%" align="right" valign="top" class="se_item"> |
|---|
| 1268 |
<span class="external_ref">SCOP Classification <font size="-2">(version 1.69)</font></span> |
|---|
| 1269 |
</td> |
|---|
| 1270 |
<td width="85%" valign="top"> |
|---|
| 1271 |
<table border="0" cellpadding="1" cellspacing="1" width="100%" > |
|---|
| 1272 |
<tr class="se_subitem1"> |
|---|
| 1273 |
<td width="12%"> |
|---|
| 1274 |
Domain Info |
|---|
| 1275 |
</td> |
|---|
| 1276 |
<td width="13%"> |
|---|
| 1277 |
Class |
|---|
| 1278 |
</td> |
|---|
| 1279 |
<td width="15%"> |
|---|
| 1280 |
Fold |
|---|
| 1281 |
</td> |
|---|
| 1282 |
<td width="15%"> |
|---|
| 1283 |
Superfamily |
|---|
| 1284 |
</td> |
|---|
| 1285 |
<td width="15%"> |
|---|
| 1286 |
Family |
|---|
| 1287 |
</td> |
|---|
| 1288 |
<td width="15%"> |
|---|
| 1289 |
Domain |
|---|
| 1290 |
</td> |
|---|
| 1291 |
<td width="15%"> |
|---|
| 1292 |
Species |
|---|
| 1293 |
</td> |
|---|
| 1294 |
</tr> |
|---|
| 1295 |
|
|---|
| 1296 |
<tr> |
|---|
| 1297 |
<td width="12%" class="se_datasmall1"> |
|---|
| 1298 |
d1cy0a_ |
|---|
| 1299 |
</td> |
|---|
| 1300 |
|
|---|
| 1301 |
<td width="13%" class="se_datasmall1"> |
|---|
| 1302 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=11&n=56572"> Multi-domain proteins (alpha and beta)</a> |
|---|
| 1303 |
</td> |
|---|
| 1304 |
|
|---|
| 1305 |
<td width="15%" class="se_datalarge1"> |
|---|
| 1306 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=11&n=56711"> Prokaryotic type I DNA topoisomerase</a> |
|---|
| 1307 |
</td> |
|---|
| 1308 |
|
|---|
| 1309 |
<td width="15%" class="se_datalarge1"> |
|---|
| 1310 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=11&n=56712"> Prokaryotic type I DNA topoisomerase</a> |
|---|
| 1311 |
</td> |
|---|
| 1312 |
|
|---|
| 1313 |
<td width="15%" class="se_datalarge1"> |
|---|
| 1314 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=11&n=56713"> Prokaryotic type I DNA topoisomerase</a> |
|---|
| 1315 |
</td> |
|---|
| 1316 |
|
|---|
| 1317 |
<td width="15%" class="se_datalarge1"> |
|---|
| 1318 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=11&n=56714"> DNA topoisomerase I, 67K N-terminal domain</a> |
|---|
| 1319 |
</td> |
|---|
| 1320 |
|
|---|
| 1321 |
<td width="15%" class="se_datalarge1"> |
|---|
| 1322 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=11&n=56715"> Escherichia coli</a> |
|---|
| 1323 |
</td> |
|---|
| 1324 |
</tr> |
|---|
| 1325 |
|
|---|
| 1326 |
</table> |
|---|
| 1327 |
</td> |
|---|
| 1328 |
</tr> |
|---|
| 1329 |
|
|---|
| 1330 |
|
|---|
| 1331 |
|
|---|
| 1332 |
<tr class="se_back2"> |
|---|
| 1333 |
<td width="15%" align="right" valign="top" class="se_item"> |
|---|
| 1334 |
<span class="external_ref">CATH Classification <font size="-2">(version v2.6.0)</font></span> |
|---|
| 1335 |
</td> |
|---|
| 1336 |
<td width="85%" valign="top"> |
|---|
| 1337 |
<table border="0" cellpadding="1" cellspacing="1" width="100%" > |
|---|
| 1338 |
<tr class="se_subitem2"> |
|---|
| 1339 |
<td width="20%"> |
|---|
| 1340 |
Domain |
|---|
| 1341 |
</td> |
|---|
| 1342 |
<td width="20%"> |
|---|
| 1343 |
Class |
|---|
| 1344 |
</td> |
|---|
| 1345 |
<td width="20%"> |
|---|
| 1346 |
Architecture |
|---|
| 1347 |
</td> |
|---|
| 1348 |
<td width="20%"> |
|---|
| 1349 |
Topology |
|---|
| 1350 |
</td> |
|---|
| 1351 |
<td width="20%"> |
|---|
| 1352 |
Homology |
|---|
| 1353 |
</td> |
|---|
| 1354 |
</tr> |
|---|
| 1355 |
|
|---|
| 1356 |
<tr> |
|---|
| 1357 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1358 |
1cy0A1 |
|---|
| 1359 |
</td> |
|---|
| 1360 |
|
|---|
| 1361 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1362 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=1274">Alpha Beta</a> |
|---|
| 1363 |
</td> |
|---|
| 1364 |
|
|---|
| 1365 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1366 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=1842">3-Layer(aba) Sandwich</a> |
|---|
| 1367 |
</td> |
|---|
| 1368 |
|
|---|
| 1369 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1370 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=1978">Rossmann fold</a> |
|---|
| 1371 |
</td> |
|---|
| 1372 |
|
|---|
| 1373 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1374 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=2009">ISOMERASE</a> |
|---|
| 1375 |
</td> |
|---|
| 1376 |
</tr> |
|---|
| 1377 |
|
|---|
| 1378 |
<tr> |
|---|
| 1379 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1380 |
1cy0A2 |
|---|
| 1381 |
</td> |
|---|
| 1382 |
|
|---|
| 1383 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1384 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=1">Mainly Alpha</a> |
|---|
| 1385 |
</td> |
|---|
| 1386 |
|
|---|
| 1387 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1388 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=2">Orthogonal Bundle</a> |
|---|
| 1389 |
</td> |
|---|
| 1390 |
|
|---|
| 1391 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1392 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=352">Topoisomerase I; domain 2</a> |
|---|
| 1393 |
</td> |
|---|
| 1394 |
|
|---|
| 1395 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1396 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=353">Topoisomerase I, domain 2</a> |
|---|
| 1397 |
</td> |
|---|
| 1398 |
</tr> |
|---|
| 1399 |
|
|---|
| 1400 |
<tr> |
|---|
| 1401 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1402 |
1cy0A3 |
|---|
| 1403 |
</td> |
|---|
| 1404 |
|
|---|
| 1405 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1406 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=762">Mainly Beta</a> |
|---|
| 1407 |
</td> |
|---|
| 1408 |
|
|---|
| 1409 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1410 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=1229">Distorted Sandwich</a> |
|---|
| 1411 |
</td> |
|---|
| 1412 |
|
|---|
| 1413 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1414 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=1248">Topoisomerase I; domain 3</a> |
|---|
| 1415 |
</td> |
|---|
| 1416 |
|
|---|
| 1417 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1418 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=1249">Topoisomerase I, domain 3</a> |
|---|
| 1419 |
</td> |
|---|
| 1420 |
</tr> |
|---|
| 1421 |
|
|---|
| 1422 |
<tr> |
|---|
| 1423 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1424 |
1cy0A4 |
|---|
| 1425 |
</td> |
|---|
| 1426 |
|
|---|
| 1427 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1428 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=1">Mainly Alpha</a> |
|---|
| 1429 |
</td> |
|---|
| 1430 |
|
|---|
| 1431 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1432 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=2">Orthogonal Bundle</a> |
|---|
| 1433 |
</td> |
|---|
| 1434 |
|
|---|
| 1435 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1436 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=307">Topoisomerase I; domain 4</a> |
|---|
| 1437 |
</td> |
|---|
| 1438 |
|
|---|
| 1439 |
<td width="20%" class="se_datasmall2"> |
|---|
| 1440 |
<a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=12&n=308">Topoisomerase I, domain 4</a> |
|---|
| 1441 |
</td> |
|---|
| 1442 |
</tr> |
|---|
| 1443 |
|
|---|
| 1444 |
</table> |
|---|
| 1445 |
</td> |
|---|
| 1446 |
</tr> |
|---|
| 1447 |
|
|---|
| 1448 |
<tr class="se_back1"> |
|---|
| 1449 |
<td width="15%" align="right" valign="top" class="se_item"> |
|---|
| 1450 |
<span class="external_ref">PFAM Classification </span> |
|---|
| 1451 |
</td> |
|---|
| 1452 |
<td width="85%" valign="top"> |
|---|
| 1453 |
<table border="0" cellpadding="1" cellspacing="1" width="100%" > |
|---|
| 1454 |
<tr class="se_subitem1"> |
|---|
| 1455 |
<td width="5%"> |
|---|
| 1456 |
Chain |
|---|
| 1457 |
</td> |
|---|
| 1458 |
<td width="20%"> |
|---|
| 1459 |
PFAM Accession |
|---|
| 1460 |
</td> |
|---|
| 1461 |
<td width="15%"> |
|---|
| 1462 |
PFAM ID |
|---|
| 1463 |
</td> |
|---|
| 1464 |
<td width="25%"> |
|---|
| 1465 |
Description |
|---|
| 1466 |
</td> |
|---|
| 1467 |
<td width="15%"> |
|---|
| 1468 |
Type |
|---|
| 1469 |
</td> |
|---|
| 1470 |
<td width="20%"> |
|---|
| 1471 |
Clan ID |
|---|
| 1472 |
</tr> |
|---|
| 1473 |
|
|---|
| 1474 |
|
|---|
| 1475 |
<tr> |
|---|
| 1476 |
<td width="5%" class="se_datasmall1"> |
|---|
| 1477 |
A |
|---|
| 1478 |
</td> |
|---|
| 1479 |
<td width="20%" class="se_datasmall1"> |
|---|
| 1480 |
<a class="se_datalarge" href="http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01131" target=resource_window>PF01131</a> |
|---|
| 1481 |
</td> |
|---|
| 1482 |
<td width="15%" class="se_datasmall1"> |
|---|
| 1483 |
Topoisom_bac |
|---|
| 1484 |
</td> |
|---|
| 1485 |
<td width="25%" class="se_datasmall1"> |
|---|
| 1486 |
DNA topoisomerase |
|---|
| 1487 |
</td> |
|---|
| 1488 |
<td width="15%" class="se_datasmall1"> |
|---|
| 1489 |
Family |
|---|
| 1490 |
</td> |
|---|
| 1491 |
<td width="20%" class="se_datasmall1" title="Clan Description: n/a"> |
|---|
| 1492 |
n/a</a> |
|---|
| 1493 |
</td> |
|---|
| 1494 |
</tr> |
|---|
| 1495 |
|
|---|
| 1496 |
<tr> |
|---|
| 1497 |
<td width="5%" class="se_datasmall1"> |
|---|
| 1498 |
A |
|---|
| 1499 |
</td> |
|---|
| 1500 |
<td width="20%" class="se_datasmall1"> |
|---|
| 1501 |
<a class="se_datalarge" href="http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01751" target=resource_window>PF01751</a> |
|---|
| 1502 |
</td> |
|---|
| 1503 |
<td width="15%" class="se_datasmall1"> |
|---|
| 1504 |
Toprim |
|---|
| 1505 |
</td> |
|---|
| 1506 |
<td width="25%" class="se_datasmall1"> |
|---|
| 1507 |
Toprim domain |
|---|
| 1508 |
</td> |
|---|
| 1509 |
<td width="15%" class="se_datasmall1"> |
|---|
| 1510 |
Family |
|---|
| 1511 |
</td> |
|---|
| 1512 |
<td width="20%" class="se_datasmall1" title="Clan Description: n/a"> |
|---|
| 1513 |
n/a</a> |
|---|
| 1514 |
</td> |
|---|
| 1515 |
</tr> |
|---|
| 1516 |
|
|---|
| 1517 |
</table> |
|---|
| 1518 |
</td> |
|---|
| 1519 |
</tr> |
|---|
| 1520 |
|
|---|
| 1521 |
|
|---|
| 1522 |
<tr class="se_back2"> |
|---|
| 1523 |
<td width="15%" align="right" valign="top" class="se_item"> |
|---|
| 1524 |
<span class="external_ref">GO Terms</span> |
|---|
| 1525 |
</td> |
|---|
| 1526 |
<td width="85%" valign="top"> |
|---|
| 1527 |
<table border="0" cellpadding="1" cellspacing="1" width="100%" > |
|---|
| 1528 |
<tr class="se_subitem1"> |
|---|
| 1529 |
<td width="25%"> |
|---|
| 1530 |
Polymer |
|---|
| 1531 |
</td> |
|---|
| 1532 |
<td width="25%"> |
|---|
| 1533 |
Molecular Function |
|---|
| 1534 |
</td> |
|---|
| 1535 |
<td width="25%"> |
|---|
| 1536 |
Biological Process |
|---|
| 1537 |
</td> |
|---|
| 1538 |
<td width="25%"> |
|---|
| 1539 |
Cellular Component |
|---|
| 1540 |
</td> |
|---|
| 1541 |
</tr> |
|---|
| 1542 |
|
|---|
| 1543 |
|
|---|
| 1544 |
<tr> |
|---|
| 1545 |
<td width="25%" class="se_datasmall1"> |
|---|
| 1546 |
DNA TOPOISOMERASE I (1CY0:A) |
|---|
| 1547 |
</td> |
|---|
| 1548 |
<td width="25%" class="se_datasmall1"> |
|---|
| 1549 |
<ul> |
|---|
| 1550 |
|
|---|
| 1551 |
<li><a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=6&n=3676">nucleic acid binding</a> |
|---|
| 1552 |
|
|---|
| 1553 |
<li><a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=6&n=3677">DNA binding</a> |
|---|
| 1554 |
|
|---|
| 1555 |
<li><a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=6&n=3916">DNA topoisomerase activity</a> |
|---|
| 1556 |
|
|---|
| 1557 |
<li><a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=6&n=3917">DNA topoisomerase type I activity</a> |
|---|
| 1558 |
|
|---|
| 1559 |
</ul> |
|---|
| 1560 |
</td> |
|---|
| 1561 |
<td width="25%" class="se_datasmall1"> |
|---|
| 1562 |
<ul> |
|---|
| 1563 |
|
|---|
| 1564 |
<li><a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=4&n=6265">DNA topological change</a> |
|---|
| 1565 |
|
|---|
| 1566 |
<li><a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=4&n=6268">DNA unwinding during replication</a> |
|---|
| 1567 |
|
|---|
| 1568 |
<li><a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=4&n=6304">DNA modification</a> |
|---|
| 1569 |
|
|---|
| 1570 |
</ul> |
|---|
| 1571 |
</td> |
|---|
| 1572 |
<td width="25%" class="se_datasmall1"> |
|---|
| 1573 |
<ul> |
|---|
| 1574 |
|
|---|
| 1575 |
<li><a class="se_datasmall" href="/pdb/search/smartSubquery.do?smartSearchSubtype=TreeQuery&t=5&n=5694">chromosome</a> |
|---|
| 1576 |
|
|---|
| 1577 |
</ul> |
|---|
| 1578 |
</td> |
|---|
| 1579 |
</tr> |
|---|
| 1580 |
|
|---|
| 1581 |
</table> |
|---|
| 1582 |
</td> |
|---|
| 1583 |
</tr> |
|---|
| 1584 |
<tr> |
|---|
| 1585 |
<td> |
|---|
| 1586 |
|
|---|
| 1587 |
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| 1588 |
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| 1589 |
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|---|
| 1590 |
<input type="hidden" name="strAuthors" value="Feinberg, H., Changela, A., Mondragon, A."> |
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| 1591 |
<input type="hidden" name="strPrimaryCitations" value="Feinberg, H., Changela, A., Mondragon, A."> |
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| 1592 |
<input type="hidden" name="strCitationTitle" value="Protein-nucleotide interactions in E. coli DNA topoisomerase I."> |
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| 1593 |
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| 1637 |
<input type="hidden" name="strKeywords" value="ISOMERASE"> |
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| 1638 |
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| 1639 |
Common Name: BACTERIA Expression System: ESCHERICHIA COLI"> |
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| 1640 |
<input type="hidden" name="strChemCompIdList" value="A3P,"> |
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| 1641 |
<input type="hidden" name="strChemCompNameList" value="ADENOSINE-3'-5'-DIPHOSPHATE,"> |
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| 1642 |
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| 1643 |
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| 1644 |
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| 1645 |
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| 1646 |
<input type="hidden" name="strScopFamDesc" value="Prokaryotic type I DNA topoisomerase"> |
|---|
| 1647 |
<input type="hidden" name="strScopDomDesc" value="DNA topoisomerase I, 67K N-terminal domain"> |
|---|
| 1648 |
<input type="hidden" name="strScopSpeciesDesc" value="Escherichia coli"> |
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| 1649 |
<input type="hidden" name="strCathDomainList" value="1cy0A1,1cy0A2,1cy0A3,1cy0A4,"> |
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| 1650 |
<input type="hidden" name="strCathClassList" value="Alpha Beta,Mainly Alpha,Mainly Beta,Mainly Alpha,"> |
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| 1651 |
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| 1652 |
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| 1653 |
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| 1661 |
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| 1662 |
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| 1664 |
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| 1665 |
</form> |
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| 1666 |
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| 1667 |
</td> |
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| 1668 |
</tr> |
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| 1669 |
</table> |
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| 1670 |
|
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| 1671 |
|
|---|
| 1672 |
</td> |
|---|
| 1673 |
</tr> |
|---|
| 1674 |
<tr> |
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| 1675 |
<td valign="top" class="maintd"> </td> |
|---|
| 1676 |
</tr> |
|---|
| 1677 |
</table> |
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| 1678 |
|
|---|
| 1679 |
</td> |
|---|
| 1680 |
</tr> |
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| 1681 |
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|---|
| 1682 |
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|---|
| 1683 |
|
|---|
| 1684 |
<tr> |
|---|
| 1685 |
<td colspan="3"> |
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| 1686 |
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| 1687 |
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|---|
| 1688 |
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|---|
| 1689 |
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<tr> |
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| 1691 |
<td class="foothomelight"><img src="/pdbstatic/images/spacer.gif" alt="" height="15" border="0"></td> |
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| 1692 |
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</tr> |
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<tr> |
|---|
| 1695 |
<td class="foothomedark1" colspan="3"> |
|---|
| 1696 |
<a class="foothomedark1" href="http://home.rcsb.org/" target="_blank"><i>© RCSB Protein Data Bank </i></a> |
|---|
| 1697 |
</td> |
|---|
| 1698 |
</tr> |
|---|
| 1699 |
|
|---|
| 1700 |
<tr> |
|---|
| 1701 |
<td colspan="3"><br></td> |
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| 1702 |
</tr> |
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| 1703 |
</table> |
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| 1704 |
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|---|
| 1705 |
</td> |
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</tr> |
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| 1707 |
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