|
Bifrost
|
Interface for the Compacted de Bruijn graph API. More...
Go to the source code of this file.
Data Structures | |
| struct | CDBG_Build_opt |
| Most members of this structure are parameters for CompactedDBG<U, G>::build(), except for: More... | |
| class | CDBG_Data_t< Unitig_data_t, Graph_data_t > |
| If data are to be associated with the unitigs of the compacted de Bruijn graph, those data must be wrapped into a class that inherits from the abstract class CDBG_Data_t. More... | |
| class | CompactedDBG< Unitig_data_t, Graph_data_t > |
| Represent a Compacted de Bruijn graph. More... | |
Typedefs | |
| template<typename U , typename G > | |
| using | const_UnitigMap = UnitigMap< U, G, true > |
| const_UnitigMap is a constant UnitigMap. More... | |
Interface for the Compacted de Bruijn graph API.
Code snippets using this interface are provided in snippets/test.cpp.
| const_UnitigMap |
const_UnitigMap is a constant UnitigMap.
The main difference in its usage with a UnitigMap object is when you call the method UnitigMap::getGraph(): with a const_UnitigMap, this method returns a pointer to a constant CompactedDBG (you can't modify it).
1.8.13