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Bloom Filter Trie
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Root vertex of a BFT. More...
Data Fields | |
| char ** | filenames |
| Inserted genome file names. More... | |
| uint64_t * | hash_v |
| uint16_t ** | skip_sp |
| annotation_array_elem * | comp_set_colors |
| info_per_level * | info_per_lvl |
| annotation_inform * | ann_inf |
| resultPresence * | res |
| int | k |
| Size of k-mers. More... | |
| int | r1 |
| int | r2 |
| int | nb_genomes |
| Number of genomes inserted. More... | |
| int | length_comp_set_colors |
| int | treshold_compression |
| Color compression is triggered every BFT_Root::treshold_compression genome inserted. More... | |
| uint8_t | compressed |
| uint8_t | marked |
| Node | node |
Root vertex of a BFT.
A BFT_Root contains the k-mer size as well as the number and name of the inserted genomes. Other contained structures and variables are for internal use only and must not be modified.
| char** BFT_Root::filenames |
Inserted genome file names.
| int BFT_Root::k |
Size of k-mers.
| int BFT_Root::nb_genomes |
Number of genomes inserted.
It corresponds to the number of files stored in BFT_Root::filenames.
| int BFT_Root::treshold_compression |
Color compression is triggered every BFT_Root::treshold_compression genome inserted.
1.8.11