|
BFGraph
|
Public Member Functions | |
| minHashIterator (int _k, int _g, HF _h) | |
| minHashIterator (const char *_s, int _length, int _k, int _g, HF _h, bool _nh) | |
| void | seed (HF &ohf) |
| void | initString (const char *_s, int _length) |
| bool | operator== (const minHashIterator &o) |
| bool | operator!= (const minHashIterator &o) |
| minHashIterator & | operator++ () |
| minHashIterator | operator++ (int) |
| minHashIterator & | operator+= (int i) |
| minHashResult | getNewMin (const minHashResult &mhr_discard) const |
| minHashResultIterator< HF > | operator* () const |
| uint64_t | getHash () const |
| int | getPosition () const |
| int | getKmerPosition () const |
| minHashIterator (const minHashIterator &o) | |
Data Fields | |
| const char * | s |
| int | n |
| int | k |
| int | g |
| HF | hf |
| deque< minHashResult > | v |
| int | p |
| bool | invalid |
| bool | nh |
1.8.13