| more {rNMR} | R Documentation |
rNMR functions
Description
A list of rNMR functions with brief descriptions is displayed below.
File
cf- convert spectra to rNMR's default format
ca- convert ASCII spectra to rNMR's default format
export- export rNMR data tables
fc- close an open spectrum
fo- open a spectrum
fs- sort files
gui- display rNMR menus
import- import rNMR data tables
rb- restore backup workspace
ss- switch to another open spectrum
wl- load an R workspace
ws- save an R workspace
Edit
ep- modify rNMR's default settings
pe- edit peak list
rd- redo last undo
re- edit the ROI table
se- edit ROI summary
ud- undo last action
Plotting
co- display the color manipulation GUI
ct- display the plot options GUI
ctd- lower contours
ctu- raise contours
da- automatically choose plot type
dd- refresh main spectrum
di- draw image plot
dp- draw 3D perspective plot
dr- draw contour plot
drf- draw filled contour plot
Perspective plots
per- display the perspective plot GUI
rotc- rotate perspective plot clockwise
rotcc- rotate perspective plot counter clockwise
rotd- rotate perspective plot down
rotu- rotate perspective plot up
spin- spin perspective plot
View
ol- display the overlay GUI
pj- 1D projection/slice GUI
pjv- toggle 1D projection display
vp- vertical position for 1D spectra, slices/projections
vpd- decrease vertical position for 1D spectra,
slices/projections
vpu- increase vertical position for 1D spectra,
slices/projections
vs- view slice
Zoom
delta- get chemical shift ranges
loc- get chemical shifts
pd- pan down
pl- pan left
pr- pan right
pu- pan up
pz- zoom to a point
zc- center window on a peak
zf- zoom full
zi- zoom in
zm- display the zoom GUI
zo- zoom out
zp- zoom previous
zz- zoom in on a manually selected region
Tools
sr- display custom library GUI
ed- extract data
mmcd- open MMCD homepage
sr- display chemical shift referencing GUI
Peak picking
nf- set peak picking noise filter
pa- pick full spectrum
pDel- clear peak list
ph- manually pick spectrum
pm- peak pick the maximum intensity within a region
pp- display peak picking GUI
pReg- peak pick a region
pv- toggle peak display
pw- pick current window
rp- pick inside/outside ROIs
Batch peak picking
paAll- pick full spectrum in all files
pDelAll- clear all peak lists
pwAll- pick current window in all files
rpAll- pick inside/outside ROIs in all files
ROIs
ra- automatically draw ROIs for window
rc- center active ROIs
rcd- contract active ROIs in the direct dimension
rci- contract active ROIs in the indirect dimension
rDel- delete ROIs
red- expand active ROIs in the direct dimension
rei- expand active ROIs in the indirect dimension
rmd- move active ROIs down (downfield indirect dimension)
rml- move active ROIs left (downfield direct dimension)
rmr- move active ROIs right (upfield direct dimension)
rmu- move active ROIs up (upfield indirect dimension)
rn- create new ROIs by hand
roi- display the ROI GUI
rr- rename active ROIs
rs- activate/deactivate ROIs from a list or plot window
rsf- select files to display in the multiple file window
rsAll- activate all ROIs
rdAll- deactivate all ROIs
rSum- generate ROI summary
rv- toggle ROI display in the main plot window
rvm- open ROI multiple file window
rvs- open ROI subplot window
Author(s)
Ian A. Lewis ialewis@nmrfam.wisc.edu,
Seth C. Schommer schommer@nmrfam.wisc.edu
See Also
gui for displaying rNMR menus; rNMR
for other rNMR help topics.
[Package
rNMR version 1.1.7
Index]